Introduction
Annotated Amino Acid (A3) format documentation
Overview
rtemis A3 provides:
- Specification: a language-agnostic JSON-based schema for storing annotated amino acid sequences and language-specific specs for A3 support
- Implementation: multi-language API for reading and writing A3 files (R, Python, Julia, TypeScript, Rust)
- Visualization: rtemislive-draw uses the @rtemis/a3 module to provide interactive visualizations of A3 files
A3 Schema
The official A3 schema is available on schema.rtemis.org. You can view it on the specification page.
A3 CLI
The rtemis_a3 crate provides a command-line interface (CLI) tool that can validate A3 files and print a summary of their contents.
